NNclean                 Nearest neighbor based clutter/noise detection
abundtest               Parametric bootstrap test for clustering in
                        abundance matrices
autoconst               Spatial autocorrelation parameter estimation
build.nblist            Generate spatial weights from prabclus
                        neighborhood list
cluspop.nb              Simulation of presence-absence matrices
                        (clustered)
comp.test               Compare species clustering and species groups
con.comp                Connectivity components of an undirected graph
con.regmat              Connected regions per species
distratio               Distance ratio test statistics for distance
                        based clustering
geco                    geco distance matrix
geo2neighbor            Neighborhood list from geographical distance
homogen.test            Classical distance-based test for homogeneity
                        against clustering
hprabclust              Clustering of species ranges from
                        presence-absence matrices (hierarchical
                        methods)
incmatrix               Nestedness matrix
jaccard                 Jaccard distance matrix
kulczynski              Kulczynski distance matrix
kykladspecreg           Snail presence-absence data from Aegean sea
lcomponent              Largest connectivity component
nb                      Neighborhood list for Aegean islands
nbtest                  Test of neighborhood list
nn                      Mean distance to kth nearest neighbor
piecewiselin            Piecewise linear transformation for distance
                        matrices
pop.sim                 p-value simulation for presence-absence
                        matrices clustering test
prab.sarestimate        Estimates SAR model from log-abundance matrix
                        of prab-object.
prabclust               Clustering of species ranges from
                        presence-absence matrices (mixture method)
prabinit                Presence-absence/abundance matrix
                        initialization
prabtest                Parametric bootstrap test for clustering in
                        presence-absence matrices
qkulczynski             Quantitative Kulczynski distance matrix
randpop.nb              Simulation of presence-absence matrices
                        (non-clustered)
regpop.sar              Simulation of abundance matrices
                        (non-clustered)
siskiyou                Herbs of the Siskiyou Mountains
specgroups              Average within-group distances for given groups
summary.prabtest        Print and summary method for prabtest
toprab                  Convert abundance matrix into binary matrix
waterdist               Overwater distances between islands in the
                        Aegean sea
