Entry: ACEdata
Aliases: ACEdata
Keywords: datasets
Description: ACE data set
URL: ../../../library/hapsim/html/ACEdata.html

Entry: allelefreqs
Aliases: allelefreqs
Keywords: utilities
Description: Estimates allele frequencies
URL: ../../../library/hapsim/html/allelefreqs.html

Entry: checkpd
Aliases: checkpd
Keywords: internal
Description: Checks that a covariance matrix is positive definite
URL: ../../../library/hapsim/html/checkpd.html

Entry: cor2dprime
Aliases: cor2dprime
Keywords: internal
Description: Correlations to D' coefficients conversion
URL: ../../../library/hapsim/html/cor2dprime.html

Entry: cortocov
Aliases: cortocov
Keywords: internal
Description: Correlation to covariance conversion
URL: ../../../library/hapsim/html/cortocov.html

Entry: covtocor
Aliases: covtocor
Keywords: internal
Description: Covariance to correlation conversion
URL: ../../../library/hapsim/html/covtocor.html

Entry: divlocus
Aliases: divlocus
Keywords: utilities
Description: Diversity score
URL: ../../../library/hapsim/html/divlocus.html

Entry: haplodata
Aliases: haplodata
Keywords: utilities
Description: Haplotype object creator
URL: ../../../library/hapsim/html/haplodata.html

Entry: haplofreqs
Aliases: haplofreqs
Keywords: utilities
Description: Haplotype frequencies
URL: ../../../library/hapsim/html/haplofreqs.html

Entry: haplosim
Aliases: haplosim
Keywords: utilities
Description: Haplotype data simulator
URL: ../../../library/hapsim/html/haplosim.html

Entry: ldplot
Aliases: ldplot
Keywords: utilities
Description: LD plot
URL: ../../../library/hapsim/html/ldplot.html

Entry: makepd
Aliases: makepd
Keywords: internal
Description: Makes a matrix positive definite
URL: ../../../library/hapsim/html/makepd.html

Entry: mergemats
Aliases: mergemats
Keywords: utilities
Description: Merges two LD matrices
URL: ../../../library/hapsim/html/mergemats.html

Entry: mse
Aliases: mse
Keywords: internal
Description: Mean Square Error
URL: ../../../library/hapsim/html/mse.html

Entry: sumsqscale
Aliases: sumsqscale
Keywords: internal
Description: Scales a matrix
URL: ../../../library/hapsim/html/sumsqscale.html
