BoolNet-package         Analyze Boolean networks
attractorsToLaTeX       Create LaTeX state table of attractors
binarizeTimeSeries      Binarize a set of real-valued time series
cellcycle               Mammalian cell cycle network
chooseNetwork           Build a network from a collection of transition
                        functions
fixGenes                Simulate knocked-out or over-expressed genes
generateRandomNKNetwork
                        Generate a random N-K Boolean network
getAttractors           Identify attractors in a Boolean network
getBasinOfAttraction    Get states in basin of attraction
getStateSummary         Retrieve summary information on a state
getTransitionTable      Retrieve the transition table of a network
loadNetwork             Load a Boolean network from a file
perturbNetwork          Perturb a Boolean network randomly
plotAttractors          Plot state table of attractors
plotNetworkWiring       Plot the wiring of a Boolean network
plotStateGraph          Visualize state transitions and attractor
                        basins
print.AttractorInfo     Print attractor cycles
print.BooleanNetwork    Print a Boolean network
print.BooleanNetworkCollection
                        Print a collection of Boolean functions from a
                        reconstruction algorithm
print.TransitionTable   Print a transition table
reconstructNetwork      Reconstruct a Boolean network from time series
                        of measurements
simplifyNetwork         Simplify the functions of a Boolean network
stateTransition         Performs a transition to the next state
toPajek                 Export a network to the Pajek file format
