MEGENA-package          co-expression network analysis
MEGENA.ModuleSummary    MEGENA module summary
Sample_Expression.RData
                        Toy example data
calculate.PFN           PFN calculation
calculate.correlation   correlation calculation
datExpr                 Toy example data
do.MEGENA               MEGENA clustering + MHA
get.hub.summary         summarize hub information.
get.union.cut           Scale-thresholding of multiscale modules.
output.geneSet.file     output gene signatures into .gmt file format
planaritytest           Boyer-Myvold Planarity test of a network
read.geneSet            .gmt file reader function
set.parallel.backend    register multiple cores for parallelization
