msc.baseline.subtract   Baseline Subtraction for Mass Spectra Data
msc.biomarkers.fill     Fill Empty Spaces in Biomarker Matrix
msc.biomarkers.read.csv
                        Read and Write biomarker matrix in CSV format
msc.classifier.run      Train and Test Chosen Classifier.
msc.classifier.test     Test a Classifier through Cross-validation
msc.copies.merge        Merge Multiple Copies of Mass Spectra Samples
msc.features.remove     Remove Highly Correlated Features
msc.features.scale      Scale Classification Data
msc.features.select     Reduce Number of Features Prior to
                        Classification
msc.mass.adjust         Perform Normalization and Mass Drift
                        Adjustment for Mass Spectra Data.
msc.mass.cut            Remove Low Mass Portion of the Mass Spectra
                        Data.
msc.msfiles.read.csv    Read Protein Mass Spectra from CSV files
msc.peaks.align         Align Peaks of Mass Spectra into a "Biomarker"
                        Matrix
msc.peaks.clust         Clusters Peaks of Mass Spectra
msc.peaks.find          Find Peaks of Mass Spectra
msc.peaks.read.csv      Read and Write Mass Spectra Peaks in CSV
                        Format
msc.preprocess.run      Preprocessing Pipeline of Protein Mass Spectra
msc.project.read        Read and Manage a Batch of Protein Mass
                        Spectra
msc.project.run         Read and Preprocess Protein Mass Spectra
msc.sample.correlation
                        Sample Correlation
read.mzXML              Read and Write mzXML Files
