caliblist              package:mscalib              R Documentation

_C_o_n_s_t_r_u_c_t_o_r

_D_e_s_c_r_i_p_t_i_o_n:

     Returns object of class caliblist.

_U_s_a_g_e:

     caliblist(class,experiment,data,...)

_A_r_g_u_m_e_n_t_s:

     ...: 

   class: string with class name "calibrestat","calibintstat".

    data: a list with calibstat objects

experiment: string with experiment name.

_D_e_t_a_i_l_s:

     Returns objects of class calibrelist and calibintlist. The name of
     the class  have to be specified as the first argument in the
     constructor.  Constructor is used by function
     getrecalib.massvectorlist & getintcalib.massvectorlist

_V_a_l_u_e:

 calibrelist : If called with first ('class') argument set to
          "calibrelist".

 calibintlist : If called with first ('class') argument set to
          "calibintlist".

_A_u_t_h_o_r(_s):

     Witold Wolski wolski@molgen.mpg.de

_S_e_e _A_l_s_o:

     'getrecalib.massvectorlist', 'getintcalib.massvectorlist',

_E_x_a_m_p_l_e_s:

      #Example calibrelist class:
      data(mvl)
      mvl<-mvl[1:10]
      res <- getrecalib(mvl)
      print(res)
      summary(res)
      image(res,what="Coef.Intercept")
      image(res,what="Coef.Slope")
      plot(res)
      hist(res)
      dres<-as.data.frame(res)
      plot(dres$Coef.Intercept,dres$PQM,xlab="Coef.Intercept",ylab="PQM")
      #greate subset.
      res2<-subset(res,PQM>10)
      length(res2)
      plot(res2)
      test<-applyrecalib(mvl, res2)

