casitas                 package:ade4                 R Documentation

_E_n_z_y_m_a_t_i_c _p_o_l_y_m_o_r_p_h_i_s_m _i_n _M_u_s _m_u_s_c_u_l_u_s

_D_e_s_c_r_i_p_t_i_o_n:

     This data set is a data frame with 74 rows (mice) and 15 columns
     (loci enzymatic polymorphism of the DNA mitochondrial). Each value
     contains 6 characters coding for two allelles. The missing values
     are coding by '000000'.

_U_s_a_g_e:

     data(casitas)

_F_o_r_m_a_t:

     The 74 individuals of  'casitas' belong to 4 groups:

     _1 24 mice of the sub-species _Mus musculus domesticus_

     _2 11 mice of the sub-species _Mus musculus castaneus_

     _3 9 mice of the sub-species _Mus musculus musculus_

     _4 30 mice from a population of the lake Casitas (California)

_S_o_u_r_c_e:

     Exemple du logiciel GENETIX. Belkhir k. et al. GENETIX, logiciel
     sous WindowsTM pour la gntique des populations.  Laboratoire
     Gnome, Populations, Interactions CNRS UMR 5000, Universit de
     Montpellier II, Montpellier (France). 
      <URL: http://www.univ-montp2.fr/~genetix/genetix/genetix.htm>

_R_e_f_e_r_e_n_c_e_s:

     Orth, A., T. Adama, W. Din and F. Bonhomme. (1998) Hybridation
     naturelle entre deux sous espces de souris domestique  _Mus
     musculus domesticus_ et _Mus musculus castaneus_ prs de Lake
     Casitas (Californie). _Genome_, *41*, 104-110.

_E_x_a_m_p_l_e_s:

     data(casitas)
     casitas.pop <- as.factor(rep(c("dome", "cast", "musc", "casi"), c(24,11,9,30)))
     table(casitas.pop,casitas[,1]) 
     casi.genet <- char2genet(casitas, casitas.pop)
     names(casi.genet)

