Entry: PI2newick
Aliases: PI2newick
Keywords: manip
Description: Import data files from Phylogenetic Independance Package
URL: ../../../library/ade4/html/PI2newick.html

Entry: RV.rtest
Aliases: RV.rtest
Keywords: multivariate nonparametric
Description: Monte-Carlo Test on the sum of eigenvalues of a co-inertia analysis (in R).
URL: ../../../library/ade4/html/RV.rtest.html

Entry: RVdist.randtest
Aliases: RVdist.randtest
Keywords: multivariate nonparametric
Description: Tests of randomization on the correlation between two distance matrices (in R).
URL: ../../../library/ade4/html/RVdist.randtest.html

Entry: abouheif.eg
Aliases: abouheif.eg
Keywords: datasets
Description: Phylogenies and quantitative traits from Abouheif
URL: ../../../library/ade4/html/abouheif.eg.html

Entry: acacia
Aliases: acacia
Keywords: datasets
Description: Spatial pattern analysis in plant communities
URL: ../../../library/ade4/html/acacia.html

Entry: ade4toR
Aliases: ade4toR Rtoade4
Keywords: utilities
Description: Format Change Utility
URL: ../../../library/ade4/html/ade4toR.html

Entry: aminoacyl
Aliases: aminoacyl
Keywords: datasets
Description: Codon usage
URL: ../../../library/ade4/html/aminoacyl.html

Entry: amova
Aliases: amova print.amova
Keywords: multivariate
Description: Analysis of molecular variance
URL: ../../../library/ade4/html/amova.html

Entry: apis108
Aliases: apis108
Keywords: datasets
Description: Allelic frequencies in ten honeybees populations at eight microsatellites loci
URL: ../../../library/ade4/html/apis108.html

Entry: ardeche
Aliases: ardeche
Keywords: datasets
Description: Fauna Table with double (row and column) partitioning
URL: ../../../library/ade4/html/ardeche.html

Entry: area.plot
Aliases: area.plot poly2area area2poly area2link area.util.contour area.util.xy
Keywords: hplot
Description: Graphical Display of Areas
URL: ../../../library/ade4/html/area.plot.html

Entry: arrival
Aliases: arrival
Keywords: datasets chron
Description: Arrivals at an intensive care unit
URL: ../../../library/ade4/html/arrival.html

Entry: as.taxo
Aliases: as.taxo
Keywords: manip
Description: Taxonomy
URL: ../../../library/ade4/html/as.taxo.html

Entry: atlas
Aliases: atlas
Keywords: datasets
Description: Small Ecological Dataset
URL: ../../../library/ade4/html/atlas.html

Entry: atya
Aliases: atya
Keywords: datasets
Description: Genetic variability of Cacadors
URL: ../../../library/ade4/html/atya.html

Entry: avijons
Aliases: avijons
Keywords: datasets
Description: Bird species distribution
URL: ../../../library/ade4/html/avijons.html

Entry: avimedi
Aliases: avimedi
Keywords: datasets
Description: Fauna Table for Constrained Ordinations
URL: ../../../library/ade4/html/avimedi.html

Entry: aviurba
Aliases: aviurba
Keywords: datasets
Description: Ecological Tables Triplet
URL: ../../../library/ade4/html/aviurba.html

Entry: bacteria
Aliases: bacteria
Keywords: datasets
Description: Genomes of 43 Bacteria
URL: ../../../library/ade4/html/bacteria.html

Entry: banque
Aliases: banque
Keywords: datasets
Description: Table of Factors
URL: ../../../library/ade4/html/banque.html

Entry: baran95
Aliases: baran95
Keywords: datasets
Description: African Estuary Fishes
URL: ../../../library/ade4/html/baran95.html

Entry: between
Aliases: between print.between plot.between
Keywords: multivariate
Description: Between-Class Analysis
URL: ../../../library/ade4/html/between.html

Entry: bf88
Aliases: bf88
Keywords: datasets
Description: Cubic Ecological Data
URL: ../../../library/ade4/html/bf88.html

Entry: bicenter.wt
Aliases: bicenter.wt
Keywords: utilities
Description: Double Weighted Centring
URL: ../../../library/ade4/html/bicenter.wt.html

Entry: bordeaux
Aliases: bordeaux
Keywords: datasets
Description: Wine Tasting
URL: ../../../library/ade4/html/bordeaux.html

Entry: bsetal97
Aliases: bsetal97
Keywords: datasets
Description: Ecological and Biological Traits
URL: ../../../library/ade4/html/bsetal97.html

Entry: buech
Aliases: buech
Keywords: datasets
Description: Buech basin
URL: ../../../library/ade4/html/buech.html

Entry: butterfly
Aliases: butterfly
Keywords: datasets
Description: Genetics-Ecology-Environment Triple
URL: ../../../library/ade4/html/butterfly.html

Entry: cailliez
Aliases: cailliez
Keywords: array
Description: Transformation to make Euclidean a distance matrix
URL: ../../../library/ade4/html/cailliez.html

Entry: capitales
Aliases: capitales
Keywords: datasets
Description: Road Distances
URL: ../../../library/ade4/html/capitales.html

Entry: carni19
Aliases: carni19
Keywords: datasets
Description: Phylogeny and quantative trait of carnivora
URL: ../../../library/ade4/html/carni19.html

Entry: carni70
Aliases: carni70
Keywords: datasets
Description: Phylogeny and quantitative traits of carnivora
URL: ../../../library/ade4/html/carni70.html

Entry: carniherbi49
Aliases: carniherbi49
Keywords: datasets
Description: Taxonomy, phylogenies and quantitative traits of carnivora and herbivora
URL: ../../../library/ade4/html/carniherbi49.html

Entry: casitas
Aliases: casitas
Keywords: datasets
Description: Enzymatic polymorphism in Mus musculus
URL: ../../../library/ade4/html/casitas.html

Entry: cca
Aliases: cca
Keywords: multivariate
Description: Canonical Correspondence Analysis
URL: ../../../library/ade4/html/cca.html

Entry: chatcat
Aliases: chatcat
Keywords: datasets
Description: Qualitative Weighted Variables
URL: ../../../library/ade4/html/chatcat.html

Entry: chats
Aliases: chats
Keywords: datasets
Description: Pair of Variables
URL: ../../../library/ade4/html/chats.html

Entry: chazeb
Aliases: chazeb
Keywords: datasets
Description: Charolais-Zebus
URL: ../../../library/ade4/html/chazeb.html

Entry: chevaine
Aliases: chevaine
Keywords: datasets
Description: Enzymatic polymorphism in Leuciscus cephalus
URL: ../../../library/ade4/html/chevaine.html

Entry: clementines
Aliases: clementines
Keywords: datasets
Description: Fruit Production
URL: ../../../library/ade4/html/clementines.html

Entry: coinertia
Aliases: coinertia print.coinertia plot.coinertia summary.coinertia
Keywords: multivariate
Description: Coinertia Analysis
URL: ../../../library/ade4/html/coinertia.html

Entry: coleo
Aliases: coleo
Keywords: datasets
Description: Table of Fuzzy Biological Traits
URL: ../../../library/ade4/html/coleo.html

Entry: corkdist
Aliases: corkdist mantelkdist RVkdist print.corkdist summary.corkdist plot.corkdist
Keywords: nonparametric
Description: Tests of randomization on the correlation between distances applied to 'kdist' objetcs
URL: ../../../library/ade4/html/corkdist.html

Entry: corvus
Aliases: corvus
Keywords: datasets
Description: Corvus morphology
URL: ../../../library/ade4/html/corvus.html

Entry: deug
Aliases: deug
Keywords: datasets
Description: Exam marks for some students
URL: ../../../library/ade4/html/deug.html

Entry: disc
Aliases: disc
Keywords: multivariate
Description: Rao's dissimilarity coefficient
URL: ../../../library/ade4/html/disc.html

Entry: discrimin
Aliases: discrimin plot.discrimin print.discrimin
Keywords: multivariate
Description: Linear Discriminant Analysis (descriptive statistic)
URL: ../../../library/ade4/html/discrimin.html

Entry: discrimin.coa
Aliases: discrimin.coa
Keywords: multivariate
Description: Discriminant Correspondence Analysis
URL: ../../../library/ade4/html/discrimin.coa.html

Entry: dist.binary
Aliases: dist.binary
Keywords: array multivariate
Description: Computation of Distance Matrices for Binary Data
URL: ../../../library/ade4/html/dist.binary.html

Entry: dist.dudi
Aliases: dist.dudi
Keywords: array multivariate
Description: Computation of the Distance Matrix of a Statistical Triplet
URL: ../../../library/ade4/html/dist.dudi.html

Entry: dist.genet
Aliases: dist.genet
Keywords: multivariate 
Description: Genetic distances from gene frequencies
URL: ../../../library/ade4/html/dist.genet.html

Entry: dist.neig
Aliases: dist.neig
Keywords: array multivariate
Description: Computation of the Distance Matrix associated to a Neighbouring Graph
URL: ../../../library/ade4/html/dist.neig.html

Entry: dist.prop
Aliases: dist.prop
Keywords: array multivariate
Description: Computation of Distance Matrices of Percentage Data
URL: ../../../library/ade4/html/dist.prop.html

Entry: dist.quant
Aliases: dist.quant
Keywords: array multivariate
Description: Computation of Distance Matrices on Quantitative Variables
URL: ../../../library/ade4/html/dist.quant.html

Entry: divc
Aliases: divc
Keywords: multivariate
Description: Rao's diversity coefficient also called quadratic entropy
URL: ../../../library/ade4/html/divc.html

Entry: dotcircle
Aliases: dotcircle
Keywords: hplot
Description: Representation of n values on a circle
URL: ../../../library/ade4/html/dotcircle.html

Entry: doubs
Aliases: doubs
Keywords: datasets
Description: Pair of Ecological Tables
URL: ../../../library/ade4/html/doubs.html

Entry: dpcoa
Aliases: dpcoa plot.dpcoa print.dpcoa
Keywords: multivariate
Description: Double principal coordinate analysis
URL: ../../../library/ade4/html/dpcoa.html

Entry: dudi
Aliases: dudi as.dudi print.dudi t.dudi is.dudi redo.dudi
Keywords: multivariate
Description: Duality Diagram
URL: ../../../library/ade4/html/dudi.html

Entry: dudi.acm
Aliases: dudi.acm acm.burt acm.disjonctif boxplot.acm
Keywords: multivariate
Description: Multiple Correspondence Analysis
URL: ../../../library/ade4/html/dudi.acm.html

Entry: dudi.coa
Aliases: dudi.coa
Keywords: multivariate
Description: Correspondence Analysis
URL: ../../../library/ade4/html/dudi.coa.html

Entry: dudi.dec
Aliases: dudi.dec
Keywords: multivariate
Description: Decentred Correspondence Analysis
URL: ../../../library/ade4/html/dudi.dec.html

Entry: dudi.fca
Aliases: dudi.fca prep.fuzzy.var
Keywords: multivariate
Description: Fuzzy Correspondence Analysis
URL: ../../../library/ade4/html/dudi.fca.html

Entry: dudi.hillsmith
Aliases: dudi.hillsmith
Keywords: multivariate
Description: Ordination of Tables mixing quantitative variables and factors
URL: ../../../library/ade4/html/dudi.hillsmith.html

Entry: dudi.mix
Aliases: dudi.mix
Keywords: multivariate
Description: Ordination of Tables mixing quantitative variables and factors
URL: ../../../library/ade4/html/dudi.mix.html

Entry: dudi.nsc
Aliases: dudi.nsc
Keywords: multivariate
Description: Non symmetric correspondence analysis
URL: ../../../library/ade4/html/dudi.nsc.html

Entry: dudi.pca
Aliases: dudi.pca
Keywords: multivariate
Description: Principal Component Analysis
URL: ../../../library/ade4/html/dudi.pca.html

Entry: dudi.pco
Aliases: dudi.pco scatter.pco
Keywords: array multivariate
Description: Principal Coordinates Analysis
URL: ../../../library/ade4/html/dudi.pco.html

Entry: dunedata
Aliases: dunedata
Keywords: datasets
Description: Dune Meadow Data
URL: ../../../library/ade4/html/dunedata.html

Entry: ecg
Aliases: ecg
Keywords: datasets
Description: Electrocardiogram data
URL: ../../../library/ade4/html/ecg.html

Entry: ecomor
Aliases: ecomor
Keywords: datasets
Description: Ecomorphological Convergence
URL: ../../../library/ade4/html/ecomor.html

Entry: elec88
Aliases: elec88
Keywords: datasets
Description: Electoral Data
URL: ../../../library/ade4/html/elec88.html

Entry: escopage
Aliases: escopage
Keywords: datasets
Description: K-tables of wine-tasting
URL: ../../../library/ade4/html/escopage.html

Entry: euro123
Aliases: euro123
Keywords: datasets
Description: Triangular Data
URL: ../../../library/ade4/html/euro123.html

Entry: fission
Aliases: fission
Keywords: datasets
Description: Fission pattern and heritable morphological traits
URL: ../../../library/ade4/html/fission.html

Entry: foucart
Aliases: foucart plot.foucart print.foucart
Keywords: multivariate
Description: K-tables Correspondence Analysis with the same rows and the same columns
URL: ../../../library/ade4/html/foucart.html

Entry: friday87
Aliases: friday87
Keywords: datasets
Description: Faunistic K-tables
URL: ../../../library/ade4/html/friday87.html

Entry: fruits
Aliases: fruits
Keywords: datasets
Description: Pair of Tables
URL: ../../../library/ade4/html/fruits.html

Entry: gearymoran
Aliases: gearymoran
Keywords: spatial ts
Description: Moran's I and Geary'c randomization tests for spatial and phylogenetic autocorrelation
URL: ../../../library/ade4/html/gearymoran.html

Entry: genet
Aliases: genet char2genet count2genet freq2genet
Keywords: multivariate
Description: A class of data: tables of populations and alleles
URL: ../../../library/ade4/html/genet.html

Entry: granulo
Aliases: granulo
Keywords: datasets
Description: Granulometric Curves
URL: ../../../library/ade4/html/granulo.html

Entry: gridrowcol
Aliases: gridrowcol
Keywords: spatial
Description: Complete regular grid analysis
URL: ../../../library/ade4/html/gridrowcol.html

Entry: housetasks
Aliases: housetasks
Keywords: datasets
Description: Contingency Table
URL: ../../../library/ade4/html/housetasks.html

Entry: humDNAm
Aliases: humDNAm
Keywords: datasets
Description: human mitochondrial DNA restriction data
URL: ../../../library/ade4/html/humDNAm.html

Entry: ichtyo
Aliases: ichtyo
Keywords: datasets
Description: Point sampling of fish community
URL: ../../../library/ade4/html/ichtyo.html

Entry: inertia.dudi
Aliases: inertia.dudi
Keywords: multivariate
Description: Statistics of inertia in a one-table analysis
URL: ../../../library/ade4/html/inertia.dudi.html

Entry: irishdata
Aliases: irishdata
Keywords: datasets
Description: Geary's Irish Data
URL: ../../../library/ade4/html/irishdata.html

Entry: is.euclid
Aliases: is.euclid summary.dist mat2dist dist2mat
Keywords: array
Description: Is a Distance Matrix Euclidean ?
URL: ../../../library/ade4/html/is.euclid.html

Entry: julliot
Aliases: julliot
Keywords: datasets
Description: Seed dispersal
URL: ../../../library/ade4/html/julliot.html

Entry: jv73
Aliases: jv73
Keywords: datasets
Description: K-tables Multi-Regions
URL: ../../../library/ade4/html/jv73.html

Entry: kcponds
Aliases: kcponds
Keywords: datasets
Description: Ponds in a nature reserve
URL: ../../../library/ade4/html/kcponds.html

Entry: kdist
Aliases: kdist c.kdist print.kdist [.kdist as.data.frame.kdist
Keywords: multivariate
Description: the class of objects 'kdist' (K distance matrices)
URL: ../../../library/ade4/html/kdist.html

Entry: kdist2ktab
Aliases: kdist2ktab
Keywords: multivariate 
Description: Transformation of K distance matrices (object 'kdist') into K Euclidean representations (object 'ktab')
URL: ../../../library/ade4/html/kdist2ktab.html

Entry: kdisteuclid
Aliases: kdisteuclid
Keywords: multivariate  utilities 
Description: a way to obtain Euclidean distance matrices
URL: ../../../library/ade4/html/kdisteuclid.html

Entry: kplot
Aliases: kplot
Keywords: multivariate hplot
Description: Generic Function for Multiple Graphs in a K-tables Analysis
URL: ../../../library/ade4/html/kplot.html

Entry: kplot.foucart
Aliases: kplot.foucart
Keywords: multivariate hplot
Description: Multiple Graphs for the Foucart's Correspondence Analysis
URL: ../../../library/ade4/html/kplot.foucart.html

Entry: kplot.mcoa
Aliases: kplot.mcoa
Keywords: multivariate hplot
Description: Multiple Graphs for a Multiple Co-inertia Analysis
URL: ../../../library/ade4/html/kplot.mcoa.html

Entry: kplot.mfa
Aliases: kplot.mfa
Keywords: multivariate hplot
Description: Multiple Graphs for a Multiple Factorial Analysis
URL: ../../../library/ade4/html/kplot.mfa.html

Entry: kplot.pta
Aliases: kplot.pta
Keywords: multivariate hplot
Description: Multiple Graphs for a Partial Triadic Analysis
URL: ../../../library/ade4/html/kplot.pta.html

Entry: kplot.sepan
Aliases: kplot.sepan kplot.sepan.coa
Keywords: multivariate hplot
Description: Multiple Graphs for Separated Analyses in a K-tables
URL: ../../../library/ade4/html/kplot.sepan.html

Entry: kplot.statis
Aliases: kplot.statis
Keywords: multivariate hplot
Description: Multiple Graphs of a STATIS Analysis
URL: ../../../library/ade4/html/kplot.statis.html

Entry: krandtest
Aliases: krandtest plot.krandtest print.krandtest
Keywords: methods
Description: Class of the Permutation Tests (in C).
URL: ../../../library/ade4/html/krandtest.html

Entry: ktab
Aliases: ktab is.ktab c.ktab [.ktab print.ktab t.ktab row.names.ktab row.names<-.ktab col.names col.names.ktab col.names<- col.names<-.ktab tab.names tab.names.ktab tab.names<- tab.names<-.ktab ktab.util.names ktab.util.addfactor<-
Keywords: multivariate
Description: the class of objects 'ktab' (K-tables)
URL: ../../../library/ade4/html/ktab.html

Entry: ktab.data.frame
Aliases: ktab.data.frame
Keywords: multivariate
Description: Creation of K-tables from a data frame
URL: ../../../library/ade4/html/ktab.data.frame.html

Entry: ktab.list.df
Aliases: ktab.list.df
Keywords: multivariate
Description: Creating a K-tables from a list of data frames.
URL: ../../../library/ade4/html/ktab.list.df.html

Entry: ktab.list.dudi
Aliases: ktab.list.dudi
Keywords: multivariate
Description: Creation of a K-tables from a list of duality diagrams
URL: ../../../library/ade4/html/ktab.list.dudi.html

Entry: ktab.match2ktabs
Aliases: ktab.match2ktabs
Keywords: multivariate
Description: STATIS and Co-Inertia : Analysis of a series of paired ecological tables
URL: ../../../library/ade4/html/ktab.match2ktabs.html

Entry: ktab.within
Aliases: ktab.within
Keywords: multivariate
Description: Process to go from a Within Analysis to a K-tables
URL: ../../../library/ade4/html/ktab.within.html

Entry: lascaux
Aliases: lascaux
Keywords: datasets
Description: Genetic/Environment and types of variables
URL: ../../../library/ade4/html/lascaux.html

Entry: lingoes
Aliases: lingoes
Keywords: array multivariate
Description: Transformation of a Distance Matrix for becoming Euclidean
URL: ../../../library/ade4/html/lingoes.html

Entry: lizards
Aliases: lizards
Keywords: datasets
Description: Phylogeny and quantitative traits of lizards
URL: ../../../library/ade4/html/lizards.html

Entry: macaca
Aliases: macaca
Keywords: datasets
Description: Landmarks
URL: ../../../library/ade4/html/macaca.html

Entry: macon
Aliases: macon
Keywords: datasets
Description: Wine Tasting
URL: ../../../library/ade4/html/macon.html

Entry: mafragh
Aliases: mafragh
Keywords: datasets
Description: Phyto-Ecological Survey
URL: ../../../library/ade4/html/mafragh.html

Entry: mantel.randtest
Aliases: mantel.randtest
Keywords: array nonparametric
Description: Mantel test (correlation between two distance matrices (in C).)
URL: ../../../library/ade4/html/mantel.randtest.html

Entry: mantel.rtest
Aliases: mantel.rtest
Keywords: array nonparametric
Description: Mantel test (correlation between two distance matrices (in R).)
URL: ../../../library/ade4/html/mantel.rtest.html

Entry: maples
Aliases: maples
Keywords: datasets
Description: Phylogeny and quantitative traits of flowers
URL: ../../../library/ade4/html/maples.html

Entry: mariages
Aliases: mariages
Keywords: datasets
Description: Correspondence Analysis Table
URL: ../../../library/ade4/html/mariages.html

Entry: mcoa
Aliases: mcoa print.mcoa summary.mcoa plot.mcoa
Keywords: multivariate
Description: Multiple CO-inertia Analysis
URL: ../../../library/ade4/html/mcoa.html

Entry: meau
Aliases: meau
Keywords: datasets
Description: Ecological Data : sites-variables, sites-species, where and when
URL: ../../../library/ade4/html/meau.html

Entry: meaudret
Aliases: meaudret
Keywords: datasets
Description: Ecological Data : sites-variables, sites-species, where and when
URL: ../../../library/ade4/html/meaudret.html

Entry: mfa
Aliases: mfa print.mfa plot.mfa summary.mfa
Keywords: multivariate
Description: Multiple Factorial Analysis
URL: ../../../library/ade4/html/mfa.html

Entry: microsatt
Aliases: microsatt
Keywords: datasets
Description: Genetic Relationships between cattle breeds with microsatellites
URL: ../../../library/ade4/html/microsatt.html

Entry: mjrochet
Aliases: mjrochet
Keywords: datasets
Description: Phylogeny and quantitative traits of teleos fishes
URL: ../../../library/ade4/html/mjrochet.html

Entry: mld
Aliases: mld haar2level
Keywords: ts spatial
Description: Multi Level Decomposition of unidimensional data
URL: ../../../library/ade4/html/mld.html

Entry: mollusc
Aliases: mollusc
Keywords: datasets
Description: Faunistic Communities and Sampling Experiment
URL: ../../../library/ade4/html/mollusc.html

Entry: monde84
Aliases: monde84
Keywords: datasets
Description: Global State of the World in 1984
URL: ../../../library/ade4/html/monde84.html

Entry: morphosport
Aliases: morphosport
Keywords: datasets
Description: Athletes' Morphology
URL: ../../../library/ade4/html/morphosport.html

Entry: mstree
Aliases: mstree
Keywords: utilities 
Description: Minimal Spanning Tree
URL: ../../../library/ade4/html/mstree.html

Entry: multispati
Aliases: multispati plot.multispati summary.multispati print.multispati
Keywords: multivariate spatial
Description: Multivariate spatial analysis
URL: ../../../library/ade4/html/multispati.html

Entry: multispati.randtest
Aliases: multispati.randtest
Keywords: multivariate spatial nonparametric
Description: Multivariate spatial autocorrelation test (in C)
URL: ../../../library/ade4/html/multispati.randtest.html

Entry: multispati.rtest
Aliases: multispati.rtest
Keywords: multivariate spatial nonparametric
Description: Multivariate spatial autocorrelation test
URL: ../../../library/ade4/html/multispati.rtest.html

Entry: neig
Aliases: neig neig.util.GtoL neig.util.LtoG print.neig summary.neig scores.neig nb2neig neig2nb neig2mat
Keywords: utilities
Description: Neighbourhood Graphs
URL: ../../../library/ade4/html/neig.html

Entry: newick.eg
Aliases: newick.eg
Keywords: datasets
Description: Phylogenetic trees in Newick format
URL: ../../../library/ade4/html/newick.eg.html

Entry: newick2phylog
Aliases: newick2phylog hclust2phylog taxo2phylog newick2phylog.addtools
Keywords: manip
Description: Create phylogeny
URL: ../../../library/ade4/html/newick2phylog.html

Entry: niche
Aliases: niche plot.niche print.niche
Keywords: multivariate
Description: Method to Analyse a pair of tables : Environmental and Faunistic Data
URL: ../../../library/ade4/html/niche.html

Entry: njplot
Aliases: njplot
Keywords: datasets
Description: Phylogeny and trait of bacteria
URL: ../../../library/ade4/html/njplot.html

Entry: olympic
Aliases: olympic
Keywords: datasets
Description: Olympic Decathlon
URL: ../../../library/ade4/html/olympic.html

Entry: oribatid
Aliases: oribatid
Keywords: datasets
Description: Oribatid mite
URL: ../../../library/ade4/html/oribatid.html

Entry: orthobasis
Aliases: orthobasis orthobasis.neig orthobasis.line orthobasis.circ orthobasis.mat orthobasis.listw orthobasis.haar print.orthobasis
Keywords: spatial ts
Description: Orthonormal basis for orthonormal transform
URL: ../../../library/ade4/html/orthobasis.html

Entry: orthogram
Aliases: orthogram
Keywords: spatial ts
Description: Orthonormal decomposition of variance
URL: ../../../library/ade4/html/orthogram.html

Entry: ours
Aliases: ours
Keywords: datasets
Description: A table of Qualitative Variables
URL: ../../../library/ade4/html/ours.html

Entry: palm
Aliases: palm
Keywords: datasets
Description: Phylogenetic and quantitative traits of amazonian palm trees
URL: ../../../library/ade4/html/palm.html

Entry: pap
Aliases: pap
Keywords: datasets
Description: Taxonomy and quantitative traits of carnivora
URL: ../../../library/ade4/html/pap.html

Entry: pcaiv
Aliases: pcaiv plot.pcaiv print.pcaiv
Keywords: multivariate
Description: Principal component analysis with respect to instrumental variables
URL: ../../../library/ade4/html/pcaiv.html

Entry: pcaivortho
Aliases: pcaivortho
Keywords: multivariate
Description: Principal Component Analysis with respect to orthogonal instrumental variables
URL: ../../../library/ade4/html/pcaivortho.html

Entry: pcoscaled
Aliases: pcoscaled
Keywords: array
Description: Simplified Analysis in Principal Coordinates
URL: ../../../library/ade4/html/pcoscaled.html

Entry: perthi02
Aliases: perthi02
Keywords: datasets
Description: Contingency Table with a partition in Molecular Biology
URL: ../../../library/ade4/html/perthi02.html

Entry: phylog
Aliases: phylog print.phylog phylog.extract phylog.permut
Keywords: manip
Description: Phylogeny
URL: ../../../library/ade4/html/phylog.html

Entry: plot.phylog
Aliases: plot.phylog radial.phylog enum.phylog
Keywords: hplot
Description: Plot phylogenies
URL: ../../../library/ade4/html/plot.phylog.html

Entry: procella
Aliases: procella
Keywords: datasets
Description: Phylogeny and quantitative traits of birds
URL: ../../../library/ade4/html/procella.html

Entry: procuste
Aliases: procuste plot.procuste print.procuste
Keywords: multivariate
Description: Simple Procruste Rotation between two sets of points
URL: ../../../library/ade4/html/procuste.html

Entry: procuste.randtest
Aliases: procuste.randtest
Keywords: multivariate nonparametric
Description: Monte-Carlo Test on the sum of the singular values of a procustean rotation (in C).
URL: ../../../library/ade4/html/procuste.randtest.html

Entry: procuste.rtest
Aliases: procuste.rtest
Keywords: multivariate nonparametric
Description: Monte-Carlo Test on the sum of the singular values of a procustean rotation (in R).
URL: ../../../library/ade4/html/procuste.rtest.html

Entry: pta
Aliases: pta print.pta plot.pta
Keywords: multivariate
Description: Partial Triadic Analysis of a K-tables
URL: ../../../library/ade4/html/pta.html

Entry: quasieuclid
Aliases: quasieuclid
Keywords: array
Description: Transformation of a distance matrice to a Euclidean one
URL: ../../../library/ade4/html/quasieuclid.html

Entry: randtest-internal
Aliases: testdiscrimin testertrace testertracenu testertracenubis testinter testprocuste testmantel testertracerlq testamova
Keywords: internal 
Description: Internal Permutation Tests functions (in C).
URL: ../../../library/ade4/html/randtest-internal.html

Entry: randtest
Aliases: randtest as.randtest plot.randtest print.randtest
Keywords: methods
Description: Class of the Permutation Tests (in C).
URL: ../../../library/ade4/html/randtest.html

Entry: randtest.amova
Aliases: randtest.amova
Keywords: multivariate nonparametric
Description: Permutation tests on an analysis of molecular variance (in C).
URL: ../../../library/ade4/html/randtest.amova.html

Entry: randtest.between
Aliases: randtest.between
Keywords: multivariate nonparametric
Description: Monte-Carlo Test on the between-groups inertia percentage (in C).
URL: ../../../library/ade4/html/randtest.between.html

Entry: randtest.coinertia
Aliases: randtest.coinertia
Keywords: multivariate nonparametric
Description: Monte-Carlo test on a coinertia analysis (in C).
URL: ../../../library/ade4/html/randtest.coinertia.html

Entry: randtest.discrimin
Aliases: randtest.discrimin
Keywords: multivariate nonparametric
Description: Monte-Carlo Test on a Discriminant Analysis (in C).
URL: ../../../library/ade4/html/randtest.discrimin.html

Entry: rankrock
Aliases: rankrock
Keywords: datasets
Description: Ordination Table
URL: ../../../library/ade4/html/rankrock.html

Entry: reconst
Aliases: reconst reconst.pca
Keywords: multivariate
Description: Reconstitution of Data from a Duality Diagram
URL: ../../../library/ade4/html/reconst.html

Entry: rhone
Aliases: rhone
Keywords: datasets
Description: Physico-Chemistry Data
URL: ../../../library/ade4/html/rhone.html

Entry: rlq
Aliases: rlq print.rlq plot.rlq summary.rlq as.coinertia randtest.rlq
Keywords: multivariate  spatial 
Description: RLQ analysis
URL: ../../../library/ade4/html/rlq.html

Entry: rpjdl
Aliases: rpjdl
Keywords: datasets
Description: Avifauna and Vegetation
URL: ../../../library/ade4/html/rpjdl.html

Entry: rtest
Aliases: rtest as.rtest plot.rtest print.rtest
Keywords: methods
Description: Class of the Permutation Tests (in R).
URL: ../../../library/ade4/html/rtest.html

Entry: rtest.between
Aliases: rtest.between
Keywords: multivariate nonparametric
Description: Monte-Carlo Test on the between-groups inertia percentage (in R).
URL: ../../../library/ade4/html/rtest.between.html

Entry: rtest.discrimin
Aliases: rtest.discrimin
Keywords: multivariate nonparametric
Description: Monte-Carlo Test on a Discriminant Analysis (in R).
URL: ../../../library/ade4/html/rtest.discrimin.html

Entry: s.arrow
Aliases: s.arrow
Keywords: multivariate hplot
Description: Plot of the factorial maps for the projection of a vector basis
URL: ../../../library/ade4/html/s.arrow.html

Entry: s.chull
Aliases: s.chull
Keywords: multivariate hplot
Description: Plot of the factorial maps with polygons of contour by level of a factor
URL: ../../../library/ade4/html/s.chull.html

Entry: s.class
Aliases: s.class
Keywords: multivariate hplot
Description: Plot of factorial maps with representation of point classes
URL: ../../../library/ade4/html/s.class.html

Entry: s.corcircle
Aliases: s.corcircle
Keywords: multivariate hplot
Description: Plot of the factorial maps of a correlation circle
URL: ../../../library/ade4/html/s.corcircle.html

Entry: s.distri
Aliases: s.distri
Keywords: multivariate hplot
Description: Plot of a frequency distribution
URL: ../../../library/ade4/html/s.distri.html

Entry: s.hist
Aliases: s.hist
Keywords: multivariate hplot
Description: Display of a scatterplot and its two marginal histograms
URL: ../../../library/ade4/html/s.hist.html

Entry: s.image
Aliases: s.image
Keywords: hplot
Description: Graph of a variable using image and contour
URL: ../../../library/ade4/html/s.image.html

Entry: s.label
Aliases: s.label
Keywords: multivariate hplot
Description: Scatter Plot
URL: ../../../library/ade4/html/s.label.html

Entry: s.match
Aliases: s.match
Keywords: multivariate hplot
Description: Plot of Paired Coordinates
URL: ../../../library/ade4/html/s.match.html

Entry: s.traject
Aliases: s.traject
Keywords: multivariate hplot
Description: Trajectory Plot
URL: ../../../library/ade4/html/s.traject.html

Entry: s.value
Aliases: s.value
Keywords: multivariate hplot
Description: Representation of a value in a graph
URL: ../../../library/ade4/html/s.value.html

Entry: santacatalina
Aliases: santacatalina
Keywords: datasets
Description: Indirect Ordination
URL: ../../../library/ade4/html/santacatalina.html

Entry: sarcelles
Aliases: sarcelles
Keywords: datasets
Description: Array of Recapture of Rings
URL: ../../../library/ade4/html/sarcelles.html

Entry: scalewt
Aliases: scalewt
Keywords: utilities
Description: Centring and Scaling a Matrix of Any Weighting
URL: ../../../library/ade4/html/scalewt.html

Entry: scatter
Aliases: scatter scatterutil.base add.scatter.eig scatterutil.chull scatterutil.eigen scatterutil.ellipse scatterutil.eti.circ scatterutil.eti scatterutil.grid scatterutil.legend.bw.square scatterutil.legend.square.grey scatterutil.legendgris scatterutil.scaling scatterutil.star scatterutil.sub
Keywords: multivariate hplot
Description: Scatter Plot
URL: ../../../library/ade4/html/scatter.html

Entry: scatter.acm
Aliases: scatter.acm
Keywords: multivariate hplot
Description: Plot of the factorial maps in multiple correspondence analysis
URL: ../../../library/ade4/html/scatter.acm.html

Entry: scatter.coa
Aliases: scatter.coa
Keywords: multivariate hplot
Description: Plot of the factorial maps for a correspondence analysis
URL: ../../../library/ade4/html/scatter.coa.html

Entry: scatter.dudi
Aliases: scatter.dudi
Keywords: multivariate hplot
Description: Plot of the Factorial Maps
URL: ../../../library/ade4/html/scatter.dudi.html

Entry: scatter.fca
Aliases: scatter.fca
Keywords: multivariate hplot
Description: Plot of the factorial maps for a fuzzy correspondence analysis
URL: ../../../library/ade4/html/scatter.fca.html

Entry: sco.boxplot
Aliases: sco.boxplot
Keywords: multivariate hplot
Description: Representation of the link between a variable and a set of qualitative variables
URL: ../../../library/ade4/html/sco.boxplot.html

Entry: sco.distri
Aliases: sco.distri
Keywords: multivariate hplot
Description: Representation by mean- standard deviation of a set of weight distributions on a numeric score
URL: ../../../library/ade4/html/sco.distri.html

Entry: sco.quant
Aliases: sco.quant
Keywords: hplot multivariate
Description: Graph to Analyse the Relation between a Score and Quantitative Variables
URL: ../../../library/ade4/html/sco.quant.html

Entry: score
Aliases: score scoreutil.base
Keywords: multivariate hplot
Description: Graphs for One Dimension
URL: ../../../library/ade4/html/score.html

Entry: score.acm
Aliases: score.acm
Keywords: multivariate hplot
Description: Graphs to study one factor in a Multiple Correspondence Analysis
URL: ../../../library/ade4/html/score.acm.html

Entry: score.coa
Aliases: score.coa
Keywords: multivariate hplot
Description: Graphs to analyse a factor in a correspondence analysis
URL: ../../../library/ade4/html/score.coa.html

Entry: score.mix
Aliases: score.mix
Keywords: multivariate hplot
Description: Graphs to Analyse a factor in a Mixed Analysis
URL: ../../../library/ade4/html/score.mix.html

Entry: score.pca
Aliases: score.pca
Keywords: multivariate hplot
Description: Graphs to Analyse a factor in PCA
URL: ../../../library/ade4/html/score.pca.html

Entry: seconde
Aliases: seconde
Keywords: datasets
Description: Students and Subjects
URL: ../../../library/ade4/html/seconde.html

Entry: sepan
Aliases: sepan plot.sepan print.sepan summary.sepan
Keywords: multivariate
Description: Separated Analyses in a K-tables
URL: ../../../library/ade4/html/sepan.html

Entry: skulls
Aliases: skulls
Keywords: datasets
Description: Morphometric Evolution
URL: ../../../library/ade4/html/skulls.html

Entry: statis
Aliases: statis print.statis plot.statis
Keywords: multivariate
Description: STATIS, a method for analysing K-tables
URL: ../../../library/ade4/html/statis.html

Entry: steppe
Aliases: steppe
Keywords: datasets
Description: Transect in the Vegetation
URL: ../../../library/ade4/html/steppe.html

Entry: supcol
Aliases: supcol supcol.coa supcol.default
Keywords: multivariate
Description: Projections of Supplementary Columns
URL: ../../../library/ade4/html/supcol.html

Entry: suprow
Aliases: suprow suprow.coa suprow.pca suprow.default
Keywords: multivariate
Description: Projections of Supplementary Rows
URL: ../../../library/ade4/html/suprow.html

Entry: symbols.phylog
Aliases: symbols.phylog dotchart.phylog
Keywords: hplot
Description: Representation of a quantitative variable in front of a phylogenetic tree
URL: ../../../library/ade4/html/symbols.phylog.html

Entry: syndicats
Aliases: syndicats
Keywords: datasets
Description: Two Questions asked on a Sample of 1000 Respondents
URL: ../../../library/ade4/html/syndicats.html

Entry: t3012
Aliases: t3012
Keywords: datasets
Description: Average temperatures of 30 French cities
URL: ../../../library/ade4/html/t3012.html

Entry: table.cont
Aliases: table.cont
Keywords: hplot
Description: Plot of Contingency Tables
URL: ../../../library/ade4/html/table.cont.html

Entry: table.dist
Aliases: table.dist
Keywords: hplot
Description: Graph Display for Distance Matrices
URL: ../../../library/ade4/html/table.dist.html

Entry: table.paint
Aliases: table.paint
Keywords: hplot
Description: Plot of the arrays by grey levels
URL: ../../../library/ade4/html/table.paint.html

Entry: table.phylog
Aliases: table.phylog
Keywords: hplot
Description: Plot arrays in front of a phylogenetic tree
URL: ../../../library/ade4/html/table.phylog.html

Entry: table.value
Aliases: table.value table.prepare
Keywords: hplot
Description: Plot of the Arrays
URL: ../../../library/ade4/html/table.value.html

Entry: tarentaise
Aliases: tarentaise
Keywords: datasets
Description: Mountain Avifauna
URL: ../../../library/ade4/html/tarentaise.html

Entry: taxo.eg
Aliases: taxo.eg
Keywords: datasets
Description: Examples of taxonomy
URL: ../../../library/ade4/html/taxo.eg.html

Entry: tintoodiel
Aliases: tintoodiel
Keywords: datasets
Description: Tinto and Odiel estuary geochemistry
URL: ../../../library/ade4/html/tintoodiel.html

Entry: tithonia
Aliases: tithonia
Keywords: datasets
Description: Phylogeny and quantitative traits of flowers
URL: ../../../library/ade4/html/tithonia.html

Entry: tortues
Aliases: tortues
Keywords: datasets
Description: Morphological Study of the Painted Turtle
URL: ../../../library/ade4/html/tortues.html

Entry: toxicity
Aliases: toxicity
Keywords: datasets
Description: Homogeneous Table
URL: ../../../library/ade4/html/toxicity.html

Entry: triangle.plot
Aliases: triangle.plot triangle.biplot triangle.param triangle.posipoint add.position.triangle
Keywords: hplot
Description: Triangular Plotting
URL: ../../../library/ade4/html/triangle.plot.html

Entry: trichometeo
Aliases: trichometeo
Keywords: datasets
Description: Pair of Ecological Data
URL: ../../../library/ade4/html/trichometeo.html

Entry: ungulates
Aliases: ungulates
Keywords: datasets
Description: Phylogeny and quantitative traits of ungulates.
URL: ../../../library/ade4/html/ungulates.html

Entry: uniquewt.df
Aliases: uniquewt.df
Keywords: utilities
Description: Elimination of Duplicated Rows in a Array
URL: ../../../library/ade4/html/uniquewt.df.html

Entry: variance.phylog
Aliases: variance.phylog
Keywords: models
Description: The phylogenetic ANOVA
URL: ../../../library/ade4/html/variance.phylog.html

Entry: veuvage
Aliases: veuvage
Keywords: datasets
Description: Example for Centring in PCA
URL: ../../../library/ade4/html/veuvage.html

Entry: westafrica
Aliases: westafrica
Keywords: datasets
Description: Freshwater fish zoogeography in west Africa
URL: ../../../library/ade4/html/westafrica.html

Entry: within
Aliases: within print.within plot.within
Keywords: multivariate
Description: Within Analyses
URL: ../../../library/ade4/html/within.html

Entry: within.pca
Aliases: within.pca
Keywords: multivariate
Description: Normed within Principal Component Analysis
URL: ../../../library/ade4/html/within.pca.html

Entry: witwit.coa
Aliases: witwit.coa summary.witwit
Keywords: multivariate
Description: Internal Correspondence Analysis
URL: ../../../library/ade4/html/witwit.coa.html

Entry: worksurv
Aliases: worksurv
Keywords: datasets
Description: French Worker Survey (1970)
URL: ../../../library/ade4/html/worksurv.html

Entry: yanomama
Aliases: yanomama
Keywords: datasets
Description: Distance Matrices
URL: ../../../library/ade4/html/yanomama.html

Entry: zealand
Aliases: zealand
Keywords: datasets
Description: Road distances in New-Zealand
URL: ../../../library/ade4/html/zealand.html
